DATA SCIENCE

LE LAB

Data: 
Or file:  Motif length: ÷
#Pops: ÷

 This applies HIGEDA for motif finding in biological sequences.

  1. Select "DNA sequences" for nucleotide sequence, or to be detected automatically;

  2. Set the number of iterations of the HGA algorithm under "#Pops";

  3. Enter the length of motifs to search under "Motif length";

  4. Enter the sequence set under "Data", or select "Data" command for simulated sequences;

  5. Select "Run" command to search for motif. Results will be reported on this webpage.


Please cite us
Thanh Le, Tom Altman and Katheleen Gardiner, 2010. HIGEDA: A hierarchical gene-set genetic based algorithm for finding subtle motifs in biological sequences, Bioinformatics, Vol. 26, pp. 302-309.